PlantTFDB
Plant Transcription Factor Database
v4.0
Previous version: v3.0
Transcription Factor Information
Basic Information | Signature Domain | Sequence | 
Basic Information? help Back to Top
TF ID MLOC_15184.1
Organism
Taxonomic ID
Taxonomic Lineage
cellular organisms; Eukaryota; Viridiplantae; Streptophyta; Streptophytina; Embryophyta; Tracheophyta; Euphyllophyta; Spermatophyta; Magnoliophyta; Mesangiospermae; Liliopsida; Petrosaviidae; commelinids; Poales; Poaceae; BOP clade; Pooideae; Triticodae; Triticeae; Hordeinae; Hordeum
Family NAC
Protein Properties Length: 291aa    MW: 32383.7 Da    PI: 9.2898
Description NAC family protein
Gene Model
Gene Model ID Type Source Coding Sequence
MLOC_15184.1genomeIBSCView CDS
Signature Domain? help Back to Top
Signature Domain
No. Domain Score E-value Start End HMM Start HMM End
1NAM1392.8e-43151513128
           NAM   3 pGfrFhPtdeelvveyLkkkvegkk......leleevikevdiykvePwdLp.kkvkaeekewyfFskrdkkyat..gkrknratksgyWkatgkdk 90 
                   pGfrFhPt+eel+ +yLk++v++++         +++i++v++y+++PwdLp  ++ a+e+ewyfF++rd ++ +  g r++r+t+ g+Wkatg+d+
  MLOC_15184.1  15 PGFRFHPTEEELLEFYLKHHVTSSSknqqlrAAPFNIIPTVHLYRHDPWDLPgLAAIASEREWYFFVPRDGRKLHagGGRPSRTTEGGFWKATGSDR 111
                   9*******************99888665554222358***************645556789********9776533399****************** PP

           NAM  91 evlsk..kgelvglkktLvfykgrapkgektdWvmheyrl 128
                   +v ++   ++lvglkktLv+y+grap+g+ktdWvm+eyrl
  MLOC_15184.1 112 AVRCAadPKRLVGLKKTLVYYQGRAPRGTKTDWVMNEYRL 151
                   ***98777788***************************98 PP

Protein Features ? help Back to Top
3D Structure
Database Entry ID E-value Start End InterPro ID Description
SuperFamilySSF1019416.67E-5011170IPR003441NAC domain
PROSITE profilePS5100552.09513170IPR003441NAC domain
PfamPF023651.9E-2415151IPR003441NAC domain
Gene Ontology ? help Back to Top
GO Term GO Category GO Description
GO:0006355Biological Processregulation of transcription, DNA-templated
GO:0003677Molecular FunctionDNA binding
Sequence ? help Back to Top
Protein Sequence    Length: 291 aa     Download sequence    Send to blast
MDRRGAAAAP SLELPGFRFH PTEEELLEFY LKHHVTSSSK NQQLRAAPFN IIPTVHLYRH  60
DPWDLPGLAA IASEREWYFF VPRDGRKLHA GGGRPSRTTE GGFWKATGSD RAVRCAADPK  120
RLVGLKKTLV YYQGRAPRGT KTDWVMNEYR LPDLGAGEQQ DVVLCKVYRK AVSLKELEQR  180
VAMEELARAR STTASHSHSH SHSSAGSPDV SSSASELAHE AAVPVQHQHH GVKKEEAVAV  240
ARPPAMRLPQ LETARGGGGL EWMQDPFLTQ LRSPWMEGLC LSPYYASVLN F
3D Structure ? help Back to Top
Structure
PDB ID Evalue Query Start Query End Hit Start Hit End Description
3ulx_A1e-3931704168Stress-induced transcription factor NAC1
Search in ModeBase
Regulation -- PlantRegMap ? help Back to Top
Source Upstream Regulator Target Gene
PlantRegMapRetrieve-
Annotation -- Nucleotide ? help Back to Top
Source Hit ID E-value Description
GenBankEU9676332e-90EU967633.1 Zea mays clone 304978 mRNA sequence.
Annotation -- Protein ? help Back to Top
Source Hit ID E-value Description
RefseqXP_002439057.11e-114hypothetical protein SORBIDRAFT_10g030770
RefseqXP_004966508.11e-114PREDICTED: NAC domain-containing protein 67-like
RefseqXP_015643570.11e-114PREDICTED: NAC transcription factor 29
TrEMBLM0UWY90.0M0UWY9_HORVD; Uncharacterized protein
STRINGMLOC_15184.10.0(Hordeum vulgare)
Orthologous Group ? help Back to Top
LineageOrthologous Group IDTaxa NumberGene Number
MonocotsOGMP177038105
Best hit in Arabidopsis thaliana ? help Back to Top
Hit ID E-value Description
AT2G17040.12e-73NAC domain containing protein 36